BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004H11LP1|AL425300
(979 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1329 1881 0.0
3x_Contig1787 153 6e-37
3x_Contig1325 147 4e-35
3x_Contig1716 145 2e-34
3x_Contig1384 145 2e-34
3x_Contig1023 145 2e-34
3x_Contig695 145 2e-34
>3x_Contig1329
Length = 7405
Score = 1881 bits (947), Expect = 0.0
Identities = 973/981 (99%), Gaps = 2/981 (0%)
Strand = Plus / Minus
Query: 1 ctactggcataactacagtgattatgaaagtttactttaactttttcaccgaggtgtcgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2118 ctactggcataactacagtgattatgaaagtttactttaactttttcaccgaggtgtcgt 2059
Query: 61 tcatgaatttggttcttgtatgtttcctagctggcatcttggaaggtaatagtactttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2058 tcatgaatttggttcttgtatgtttcctagctggcatcttggaaggtaatagtactttga 1999
Query: 121 atgataacttactaattccaactttcatgttgatattgttggaatctatgaaggaatagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1998 atgataacttactaattccaactttcatgttgatattgttggaatctatgaaggaatagt 1939
Query: 181 attgatagatagtcaaacctgttatgcaaaacctatatattcaaaatttgagtatgtagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1938 attgatagatagtcaaacctgttatgcaaaacctatatattcaaaatttgagtatgtagt 1879
Query: 241 aaatttatagattagggcctatttttgttccaagggtacttcactgaccatgtttccatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1878 aaatttatagattagggcctatttttgttccaagggtacttcactgaccatgtttccatc 1819
Query: 301 tttcttgcttctgaataagatttgaatggtcaaaatgcgttataagttagtattgtgaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1818 tttcttgcttctgaataagatttgaatggtcaaaatgcgttataagttagtattgtgaaa 1759
Query: 361 cgtaatgatataaatagaaaatcatgtttacacggag-ggtgatggttcactcaaaactc 419
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1758 cgtaatgatataaatagaaaatcatgtttacacggagtggtgatggttcactcaaaactc 1699
Query: 420 ttgttaataagaaattagggcgtgtggcgtagttggtagcgcgctcccttagcatgggag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1698 ttgttaataagaaattagggcgtgtggcgtagttggtagcgcgctcccttagcatgggag 1639
Query: 480 aggtcttcggttcgactccggactcgtccaatctttttatttcccctgttcattctggac 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1638 aggtcttcggttcgactccggactcgtccaatctttttatttcccctgttcattctggac 1579
Query: 540 caatgatctctttttttgatataacgatgtggtgcctattacacacaagctgagaatgtt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1578 caatgatctctttttttgatataacgatgtggtgcctattacacacaagctgagaatgtt 1519
Query: 600 ctgagaattcgtttacaaacatttcatatcatttacgttaaatatattatacgtgtttac 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1518 ctgagaattcgtttacaaacatttcatatcatttacgttaaatatattatacgtgtttac 1459
Query: 660 tatttatttttgataatctttacttttcaatgtatagtttgaaatcaaagaatgattcga 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1458 tatttatttttgataatctttacttttcaatgtatagtttgaaatcaaagaatgattcga 1399
Query: 720 ggaatatataagaagaaagatgcttcagatggcgagataaataaaaaaaaaaatagacga 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1398 ggaatatataagaagaaagatgcttcagatggcgagataaataaaaaaaaaaatagacga 1339
Query: 780 caactggatacgacgtaccattgttaagtagcttattatagttattgatatcaagcagct 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1338 caactggatacgacgtaccattgttaagtagcttattatagttattgatatcaagcagct 1279
Query: 840 tcaattatccgcaattttttttttccacttcgctttatcaagaaaaattagaagttgatt 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1278 tcaattatccgcaattttttttttccacttcgctttatcaagaaaaattagaagttgatt 1219
Query: 900 ggcttggcgtaasagcytaagttagcttccttgaaagcytcggatagagttggatgagcg 959
|||||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1218 ggcttggcgtaagcagctaagttagcttccttgaaagcttcggatagagttggatgagcg 1159
Query: 960 tgac-aactctagcgatgtct 979
|||| ||||||||||||||||
Sbjct: 1158 tgacaaactctagcgatgtct 1138
>3x_Contig1787
Length = 34189
Score = 153 bits (77), Expect = 6e-37
Identities = 83/85 (97%)
Strand = Plus / Plus
Query: 437 gggcgtgtggcgtagttggtagcgcgctcccttagcatgggagaggtcttcggttcgact 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6967 gggcgtgtggcgtagttggtagcgcgctcccttagcatgggagaggtcttcggttcgact 7026
Query: 497 ccggactcgtccaatctttttattt 521
|||||||||||||| |||||||||
Sbjct: 7027 ccggactcgtccaaaatttttattt 7051
>3x_Contig1325
Length = 7053
Score = 147 bits (74), Expect = 4e-35
Identities = 81/82 (98%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 429 agaaatta-gggcgtgtggcgtagttggtagcgcgctcccttagcatgggagaggtcttc 487
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5957 agaaattacgggcgtgtggcgtagttggtagcgcgctcccttagcatgggagaggtcttc 6016
Query: 488 ggttcgactccggactcgtcca 509
||||||||||||||||||||||
Sbjct: 6017 ggttcgactccggactcgtcca 6038
>3x_Contig1716
Length = 19108
Score = 145 bits (73), Expect = 2e-34
Identities = 73/73 (100%)
Strand = Plus / Minus
Query: 437 gggcgtgtggcgtagttggtagcgcgctcccttagcatgggagaggtcttcggttcgact 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 gggcgtgtggcgtagttggtagcgcgctcccttagcatgggagaggtcttcggttcgact 1202
Query: 497 ccggactcgtcca 509
|||||||||||||
Sbjct: 1201 ccggactcgtcca 1189
>3x_Contig1384
Length = 9372
Score = 145 bits (73), Expect = 2e-34
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 437 gggcgtgtggcgtagttggtagcgcgctcccttagcatgggagaggtcttcggttcgact 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gggcgtgtggcgtagttggtagcgcgctcccttagcatgggagaggtcttcggttcgact 324
Query: 497 ccggactcgtcca 509
|||||||||||||
Sbjct: 325 ccggactcgtcca 337
>3x_Contig1023
Length = 4339
Score = 145 bits (73), Expect = 2e-34
Identities = 73/73 (100%)
Strand = Plus / Minus
Query: 437 gggcgtgtggcgtagttggtagcgcgctcccttagcatgggagaggtcttcggttcgact 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2738 gggcgtgtggcgtagttggtagcgcgctcccttagcatgggagaggtcttcggttcgact 2679
Query: 497 ccggactcgtcca 509
|||||||||||||
Sbjct: 2678 ccggactcgtcca 2666
>3x_Contig695
Length = 2059
Score = 145 bits (73), Expect = 2e-34
Identities = 73/73 (100%)
Strand = Plus / Minus
Query: 437 gggcgtgtggcgtagttggtagcgcgctcccttagcatgggagaggtcttcggttcgact 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933 gggcgtgtggcgtagttggtagcgcgctcccttagcatgggagaggtcttcggttcgact 874
Query: 497 ccggactcgtcca 509
|||||||||||||
Sbjct: 873 ccggactcgtcca 861
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,705
Number of Sequences: 1807
Number of extensions: 15705
Number of successful extensions: 181
Number of sequences better than 1.0e-20: 7
length of query: 979
length of database: 10,358,551
effective HSP length: 16
effective length of query: 963
effective length of database: 10,329,639
effective search space: 9947442357
effective search space used: 9947442357
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)